+ QuickBooks Connector
Amazon deposits
not matching
in QuickBooks?
See every fee, refund, and payout mapped correctly. No spreadsheets.
Built for multi-channel sellers · Free expert onboarding
Your books are only as good as your data.
Amazon settlements are complex. Most sellers are overpaying taxes or missing fees without ever knowing it.
FBA fees, referral fees, storage charges. Manually parsing Amazon payouts takes hours and still produces errors.
Orders in Amazon but not QuickBooks means your P&L, COGS, and tax filings are always guesswork.
Selling on Amazon and Shopify? Reconciling across channels manually is a full-time job and still gets messy.
Accurate books in 3 steps.
Authorize in minutes. Webgility maps your chart of accounts automatically. No developer needed.
Orders, fees, refunds, settlements, inventory. Posted to the right QuickBooks accounts, automatically.
Real-time, item-level financials. Tax-ready. No reconciliation nightmares. Just confidence in your numbers.
Every other Amazon connector just goes A to B
Webgility goes Beyond Sync.
Every Amazon connector syncs orders. Only Webgility decodes settlements, maps fees, handles exceptions, and protects your books before bad data gets in.
See how it works for your Amazon + Shopify setup.
Every order. Every channel. Posted right.
Webgility pulls orders from Amazon Seller Central and your Shopify store, maps each line item to your QuickBooks chart of accounts, and posts them automatically — with the detail your accountant actually needs.
- ✔ Amazon FBA, FBM, and MCF orders all supported
- ✔ Shopify POS + online orders unified
- ✔ Tax, shipping, discounts, and channel fees itemized
- ✔ Custom mapping rules per channel
Bank deposits finally make sense.
Amazon settlement reports are 30+ line items of fees, refunds, and adjustments. Shopify payouts bundle everything together. Webgility breaks each one down, matches it to the orders, and reconciles to your bank deposit automatically.
- ✔ Amazon settlement decomposition — every fee line itemized
- ✔ Shopify payout matching to individual orders
- ✔ Bank deposit reconciliation in QuickBooks
- ✔ Discrepancy alerts before your books close
Frequently asked questions
Yes. Webgility decodes your Amazon settlement reports and maps every fee type — referral fees, FBA fulfillment, pick-and-pack, storage, and return processing — to the correct QuickBooks account. No manual parsing.
Yes, Webgility handles both Fulfilled by Amazon (FBA) and Fulfilled by Merchant (FBM) orders. Each model has different fee structures and inventory flows, and Webgility maps both correctly to QuickBooks.
Webgility supports 50+ sales channels including Shopify, Walmart, eBay, BigCommerce, and more. All channels feed into one QuickBooks workflow with consistent posting rules.
Webgility works with QuickBooks Online, QuickBooks Desktop, QB Enterprise, and QB Advanced. It is the #1 rated QuickBooks connector in the QuickBooks App Store.
Most customers are live within a few days. Every plan includes free expert onboarding — a dedicated specialist configures your Amazon fee mapping, QuickBooks posting rules, and validates your first sync before you go live.
Find out what your books
actually know right now.
15-minute call. We connect to your QuickBooks, look at your Amazon data, and show you exactly what’s posting correctly — and what’s falling through the cracks.
Or start with a trial: Try Webgility free for 14 days →
